The detailed information of tRNA gene sequence


Sequence ID>WENV170978116
Genome IDMTKZ01041200
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 13841
End posion on genome 13918
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gaggcttgct
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTTAGCGCACCTGCTTTGGGAGCAGGGGGTCGAAGGTTCGA
ATCCTTTCGCCCCGACCA
Downstream region at tRNA end position 
tccgaaatcc
Secondary structure (Cloverleaf model)
>WENV170978116	Pro	TGG
                   t      ACCA tccgaaatcc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T T T C C     A
    C C G A        A      + | | | |     G
  T         C G C G       G A A G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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