The detailed information of tRNA gene sequence


Sequence ID>WENV170978126
Genome IDMTKZ01041265
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 645
End posion on genome 570
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
aaggtggttg
tRNA gene sequence 
GGGCCCGTAGCTTAGTTGGTAGAGCGCCTCCATGGCATGGAGGAGGTCAGGAGTTCAAGT
CTCCTCGGGTCCACCA
Downstream region at tRNA end position 
atcttgaaac
Secondary structure (Cloverleaf model)
>WENV170978126	Ala	GGC
                   g      ACCA atcttgaaac
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     T C C T C     A
      T G A        A      | | | | |     A
    T       T T C G       A G G A G     C
    G       + | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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