The detailed information of tRNA gene sequence


Sequence ID>WENV170978129
Genome IDMTKZ01041328
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1200
End posion on genome 1115
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
gaacagccga
tRNA gene sequence 
GCCGAAGTGGCGGAATGGCAGACGCGCTAGGTTCAGGACCTAGTGAGCATTATCGCTCGT
GAGGGTTCAACTCCCTCCTTCGGCACtg
Downstream region at tRNA end position 
gaacgtcgag
Secondary structure (Cloverleaf model)
>WENV170978129	Leu	CAG
                   a      ACtg gaacgtcgag
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T C
                    T     C T C C C     A
      T A A        G      | | | | |     A
    G       G G C G       G A G G G     C
    G         | | |                 T T
    C       A C G C
      A G          G     TGAGCATTATCGCTCGT
                    C - G
                    T - A
                    A - T
                    G - C
                    G - C
                  T       A
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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