The detailed information of tRNA gene sequence


Sequence ID>WENV170978131
Genome IDMTKZ01041341
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1803
End posion on genome 1877
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cggagcgcat
tRNA gene sequence 
GGCTCGGTAGCTCAGCTGGTCAGAGCGCACGACTCATAATCGTGAGGTCGCGGGATCGAG
CCCCGCCCGAGCTACag
Downstream region at tRNA end position 
gtacgcgaaa
Secondary structure (Cloverleaf model)
>WENV170978131	Met	CAT
                   t      ACag gtacgcgaaa
                     G + T
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C          C G
                    T     C G C C C     A
      C G A        A      | | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 A T
    G       G A G C
      T C A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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