The detailed information of tRNA gene sequence


Sequence ID>WENV170978148
Genome IDMTKZ01041791
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1423
End posion on genome 1351
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gaaaatatat
tRNA gene sequence 
TGCGGGGTGGAGCAGTGGCAGCTCGTTGGGCTCATAACCCAAAGGTCGGAGGTTCGAATC
CTCCCTCCGCTACtc
Downstream region at tRNA end position 
attcagaaga
Secondary structure (Cloverleaf model)
>WENV170978148	Met	CAT
                   t      ACtc attcagaaga
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     C C T C C     A
        G A        G      | | | | |     G
      T     C G A G       G G A G G     C
      G     | | | |                 T T
      G     G C T C
        C A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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