The detailed information of tRNA gene sequence


Sequence ID>WENV170978152
Genome IDMTKZ01041939
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3287
End posion on genome 3213
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
cgataatatt
tRNA gene sequence 
CGGGGTGTAGCACAGTTGGCTAGCGCGCTACGTTCGGGACGTAGAGGTCGGAAGTTCGAG
TCTTCTCACCCCGACtg
Downstream region at tRNA end position 
agtaagtcaa
Secondary structure (Cloverleaf model)
>WENV170978152	Pro	CGG
                   t      ACtg agtaagtcaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T C T T C     A
      T G A        A      + | | | |     G
    T       C A C G       G G A A G     C
    G       |   | |                 T T
    G       G C G C
      C T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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