The detailed information of tRNA gene sequence


Sequence ID>WENV170978163
Genome IDMTKZ01042282
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5703
End posion on genome 5626
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gtatcgtcaT
tRNA gene sequence 
GGGGCTGTAGCTCATCCGGGAGAGCGCAACACTGGCAGTGTTGAGGTACGGGGTTCGAGT
CCCCGCAGCTCCACCC
Downstream region at tRNA end position 
Acatggatga
Secondary structure (Cloverleaf model)
>WENV170978163	Ala	GGC
                   T      ACCC Acatggatga
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     G C C C C     A
      C T A        A      | | | | |     G
    C       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTA
                    C - G
                    A - T
                    A - T
                    C - G
                    A - T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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