The detailed information of tRNA gene sequence


Sequence ID>WENV170978166
Genome IDMTKZ01042390
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2246
End posion on genome 2338
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
gggcggaatt
tRNA gene sequence 
GGGCGCGTGGCCTAGTCAGGATAAGGCGGCAGCCTCCTAAGCTGTANNGCCTCCTAAGCT
GTAGATCGGGGGTTCGAATCCCTCTGCGCCCGCtt
Downstream region at tRNA end position 
gttttttgat
Secondary structure (Cloverleaf model)
>WENV170978166	Arg	CCT
                   t      GCtt gttttttgat
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G + T          T A
                    T     C T C C C     A
    C T G A        G      | + | | |     G
  A         T C C G       G G G G G     C
  G         | | | |                 T T
  G         A G G C
    A T A          G     ANNGCCTCCTAAGCTGTAGATC
                    G + T
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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