The detailed information of tRNA gene sequence


Sequence ID>WENV170978170
Genome IDMTKZ01042793
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3890
End posion on genome 3966
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
catcgacgaa
tRNA gene sequence 
GGGCGTTTAGCTCAGTTGGTTAGAGCGCGTGCCTCACATGCACGAGGTCACTGGTTCAAC
TCCAGTAACGCCCACCA
Downstream region at tRNA end position 
ccctccaaat
Secondary structure (Cloverleaf model)
>WENV170978170	Val	CAC
                   a      ACCA ccctccaaat
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     T - A          T C
                    T     T G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G - C
                    T - A
                    G - C
                    C - G
                  C       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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