The detailed information of tRNA gene sequence


Sequence ID>WENV170978172
Genome IDMTKZ01042820
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2892
End posion on genome 2816
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tcaacctcgc
tRNA gene sequence 
CGGGGTGTAGCGCAGTCGGCTAGCGCGCTGCGTTTGGGACGCAGAGGTCGACGGTTCGAG
TCCGCCCACCCCGACCT
Downstream region at tRNA end position 
ttttcttcag
Secondary structure (Cloverleaf model)
>WENV170978172	Pro	TGG
                   c      ACCT ttttcttcag
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C C G C C     A
      T G A        A      |   | | |     G
    C       C G C G       G A C G G     C
    G       | | | |                 T T
    G       G C G C
      C T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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