The detailed information of tRNA gene sequence


Sequence ID>WENV170978175
Genome IDMTKZ01042940
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5154
End posion on genome 5078
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtcccaaagc
tRNA gene sequence 
GGGCCTATAGCTCAGTCGGTTAGAGCGCTTCCCTGCTAAGGAAGAGGTCACTGGTTCAAG
TCCAGTTAGGCCCACCC
Downstream region at tRNA end position 
ttgaaaccct
Secondary structure (Cloverleaf model)
>WENV170978175	Ser	GCT
                   c      ACCC ttgaaaccct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     A - T          T G
                    T     T G A C C     A
      T G A        A      | | | | |     A
    C       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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