The detailed information of tRNA gene sequence


Sequence ID>WENV170978185
Genome IDMTKZ01043076
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 31057
End posion on genome 31133
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tattttaagt
tRNA gene sequence 
GGGTTTGTAGCTCAGTTGGTTAGAGCGCTGCATTCACATTGCAGAGGTCCCTGGTTCGAT
CCCAGGCAAGCCCACCA
Downstream region at tRNA end position 
ttatagcaga
Secondary structure (Cloverleaf model)
>WENV170978185	Val	CAC
                   t      ACCA ttatagcaga
                     G - C
                     G - C
                     G - C
                     T + G
                     T - A
                     T - A
                     G - C          C T
                    T     G G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    A - T
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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