The detailed information of tRNA gene sequence


Sequence ID>WENV170978192
Genome IDMTKZ01043281
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 841
End posion on genome 751
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gccgtttttc
tRNA gene sequence 
GGAGAGATGCAGGAGTGGTTTAACTGGCTCGCCTGGAAAGCGAGTATACCTCAAAAGGGT
ATCGGGGGTTCGAATCCCCCTTTCTCCGCAA
Downstream region at tRNA end position 
ctgacaatac
Secondary structure (Cloverleaf model)
>WENV170978192	Ser	GGA
                   c      GCAA ctgacaatac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     A - T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G G A C       G G G G G     C
    G         | | |                 T T
    T       A C T G
      T T A        G     TATACCTCAAAAGGGTATC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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