The detailed information of tRNA gene sequence


Sequence ID>WENV170978203
Genome IDMTKZ01043642
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3049
End posion on genome 2961
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
nngctcacgc
tRNA gene sequence 
GGAGAGGTCGCATAGTTGGCCTAGTGCGCTCGCTTGGAAAGCGAGTATACCGAGAGGTAT
CGCGGGTTCGAATCCCGCCCTCTCCGCCT
Downstream region at tRNA end position 
cgaccaccta
Secondary structure (Cloverleaf model)
>WENV170978203	Ser	GGA
                   c      GCCT cgaccaccta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    T T G A        C      | | | | |     G
  G         T A C G       G C G G G     C
  G         + | | |                 T T
  C         G T G C
    C T A          G     TATACCGAGAGGTATC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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