The detailed information of tRNA gene sequence


Sequence ID>WENV170978210
Genome IDMTKZ01043807
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1136
End posion on genome 1060
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cagggaatgt
tRNA gene sequence 
GGGCGGTTAGCTCAGCTGGTAGAGCGATTGCTTCACACGCAATAGGTTCACTGGTTCAAG
TCCAGTACCGCCCACCA
Downstream region at tRNA end position 
ttaagcgtat
Secondary structure (Cloverleaf model)
>WENV170978210	Val	CAC
                   t      ACCA ttaagcgtat
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          T G
                    T     T G A C C     A
      C G A        A      | | | | |     A
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTTC
                    A - T
                    T - A
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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