The detailed information of tRNA gene sequence


Sequence ID>WENV170978216
Genome IDMTKZ01043854
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 541
End posion on genome 631
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaataaggaa
tRNA gene sequence 
GGAGATGTGTCCGAGTTGGCTGAAGGAGCACGATTGGAAATCGTGTAAACGCGTGAGCGT
TTCTAGGGTTCGAATCCCTGCATCTCCGCCA
Downstream region at tRNA end position 
ttatttttag
Secondary structure (Cloverleaf model)
>WENV170978216	Ser	GGA
                   a      GCCA ttatttttag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     G T C C C     A
    T T G A        G      + | | | |     G
  G         G C C T       T A G G G     C
  G           | | |                 T T
  C         A G G A
    T G A          G     TAAACGCGTGAGCGTTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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