The detailed information of tRNA gene sequence


Sequence ID>WENV170978217
Genome IDMTKZ01043872
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1153
End posion on genome 1066
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
atgatcgatg
tRNA gene sequence 
GCCGGAGTGGTGGAAGTGGAAGACGCGCCGGACTCAAAATCCGGTGGTACTCGGTACTGT
GCGGGTTCAAGCCCCGCCTCCGGCACCA
Downstream region at tRNA end position 
aaaatgccgt
Secondary structure (Cloverleaf model)
>WENV170978217	Leu	CAA
                   g      ACCA aaaatgccgt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          C G
                    T     C G C C C     A
      G A A        G      | | | | |     A
    T       G G T G       G C G G G     C
    G         | + |                 T T
    G       A C G C
      A A G        G     TGGTACTCGGTACTGT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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