The detailed information of tRNA gene sequence


Sequence ID>WENV170978218
Genome IDMTKZ01043895
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2023
End posion on genome 1934
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gtggctcgcc
tRNA gene sequence 
GGAGAGATGGCGGAGTGGCCTATCGCGCCGGTCTTGAAAACCGGATCCCGCGCAAGCGGG
ACGGGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
cggctcggca
Secondary structure (Cloverleaf model)
>WENV170978218	Ser	TGA
                   c      GCCA cggctcggca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G G C G       G G G G G     C
    G       + | | |                 T T
    C       T C G C
      C T A        G     ATCCCGCGCAAGCGGGAC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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