The detailed information of tRNA gene sequence


Sequence ID>WENV170978220
Genome IDMTKZ01043983
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2811
End posion on genome 2900
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aacaagccaa
tRNA gene sequence 
GGAGAGATGCCTGAGTGGTTGAAAGGGGCACCCTGCTAAGGTGTTAGTCGTGAAAGCGGC
TCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gttaggaaaa
Secondary structure (Cloverleaf model)
>WENV170978220	Ser	GCT
                   a      GCCA gttaggaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C C       G A G G G     C
    G         | | |                 T T
    T       A A G G
      T G A        G     TAGTCGTGAAAGCGGCTC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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