The detailed information of tRNA gene sequence


Sequence ID>WENV170978221
Genome IDMTKZ01043983
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4586
End posion on genome 4675
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
taaaataatt
tRNA gene sequence 
GGAGAGGTGCCAGAGCGGTTTAATGGAACAGTCTTGAAAACTGTCGTCCGTGAAAGCGGA
CCGCGAGTTCGAATCTCGCCCTCTCCGCCA
Downstream region at tRNA end position 
cgtcgtgcta
Secondary structure (Cloverleaf model)
>WENV170978221	Ser	TGA
                   t      GCCA cgtcgtgcta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C T C     A
      C G A        G      | | | | |     G
    G       G A C C       G C G A G     C
    G         | | |                 T T
    T       A T G G
      T T A        A     CGTCCGTGAAAGCGGACC
                    A - T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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