The detailed information of tRNA gene sequence


Sequence ID>WENV170978226
Genome IDMTKZ01043983
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 64329
End posion on genome 64253
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gggattttta
tRNA gene sequence 
GGACGCATAGCTCAGTTGGTTAGAGCGTACGGTTCACATCCGTAAGGTCACAGGTTCAAA
TCCTGTTGCGTCCACCA
Downstream region at tRNA end position 
gttaagcaaa
Secondary structure (Cloverleaf model)
>WENV170978226	Val	CAC
                   a      ACCA gttaagcaaa
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C
                     C - G
                     A - T          T A
                    T     T G T C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    A - T
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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