The detailed information of tRNA gene sequence


Sequence ID>WENV170978230
Genome IDMTKZ01043996
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 893
End posion on genome 982
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aactttatta
tRNA gene sequence 
GGAGAGGTGCGAGAGCGGTTTAATCGGCACGCCTGGAGAGCGTGTGTGGCCGTAAGGTTA
CCGAGGGTTCGAATCCCTCCCTCTCCGCTA
Downstream region at tRNA end position 
attttaaaaa
Secondary structure (Cloverleaf model)
>WENV170978230	Ser	GGA
                   a      GCTA attttaaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G A G C       G A G G G     C
    G         | | |                 T T
    T       A T C G
      T T A        G     TGTGGCCGTAAGGTTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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