The detailed information of tRNA gene sequence


Sequence ID>WENV170978231
Genome IDMTKZ01043996
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 999
End posion on genome 1088
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aaaaacaacg
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGTTAAATGGGCCGGTCTTGAAAACCGGAGTATCCGTAAGGGTA
CCGCGAGTTCGAATCTCGCCCTCTCCGCCA
Downstream region at tRNA end position 
gttggaaaaa
Secondary structure (Cloverleaf model)
>WENV170978231	Ser	TGA
                   g      GCCA gttggaaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C T C     A
      T G A        G      | | | | |     G
    G       G A C C       G C G A G     C
    G         | | |                 T T
    T       A T G G
      T A A        G     AGTATCCGTAAGGGTACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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