The detailed information of tRNA gene sequence


Sequence ID>WENV170978233
Genome IDMTKZ01044005
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1396
End posion on genome 1322
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ccctatccgc
tRNA gene sequence 
GCTCCGGTAGTGTAGCTCGGCCAATCATGAAGGACTCTCACTCCTTCGACTTGGGTTCAA
ATCCCAACCGGAGCAtat
Downstream region at tRNA end position 
aattataagt
Secondary structure (Cloverleaf model)
>WENV170978233	Glu	CTC
                   c      Atat aattataagt
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     A A C C C     A
    T C G A        A      | | | | |     A
  C         T G T G       T T G G G     C
  G           | | +                 T T
  G         T C A T
    C C A A        G     CGAC
                    A - T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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