The detailed information of tRNA gene sequence


Sequence ID>WENV170978234
Genome IDMTKZ01044021
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 214
End posion on genome 130
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tttcatatat
tRNA gene sequence 
GCCGGGATAGTCTAGTCAGGTAAGGCGTAGGATTCGAAATCCTATGAGTGATGCTCACCC
TGGGTTCAAATCCCAGTCCCGGCGCtt
Downstream region at tRNA end position 
agattaatat
Secondary structure (Cloverleaf model)
>WENV170978234	Ser	CGA
                   t      GCtt agattaatat
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G A C C C     A
      T G A        A      | | | | |     A
    C       T C T G       C T G G G     C
    A       | | + |                 T T
    G       A G G C
      G T A        G     TGAGTGATGCTCACC
                    T - A
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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