The detailed information of tRNA gene sequence


Sequence ID>WENV170978240
Genome IDMTKZ01044241
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 39
End posion on genome 115
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cgatgtattt
tRNA gene sequence 
GGAGTGGTAGCTCAATTGGTTAGAGCATCTCACTGTCACTGAGAAGGTTGCGGGTTCGAG
TCCCGTCCATTCCGCCA
Downstream region at tRNA end position 
ttttcaatat
Secondary structure (Cloverleaf model)
>WENV170978240	Asp	GTC
                   t      GCCA ttttcaatat
                     G - C
                     G - C
                     A - T
                     G + T
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T A A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTT
                    T - A
                    C - G
                    T - A
                    C - G
                    A - T
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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