The detailed information of tRNA gene sequence


Sequence ID>WENV170978243
Genome IDMTKZ01044255
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2459
End posion on genome 2385
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
atctgcacaT
tRNA gene sequence 
GGCCCTGTAGCTCAATTGGCAGAGCAAGCGCCTCTTAAGCGTTAGGTTCTGGGTTCGAGT
CCCAGCAGGGTCATtt
Downstream region at tRNA end position 
tccatttaaa
Secondary structure (Cloverleaf model)
>WENV170978243	Lys	CTT
                   T      ATtt tccatttaaa
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     G A C C C     A
      T A A        A      | | | | |     G
    T       C T C G       C T G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    A - T
                    G + T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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