The detailed information of tRNA gene sequence


Sequence ID>WENV170978244
Genome IDMTKZ01044260
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4842
End posion on genome 4751
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aactgtttat
tRNA gene sequence 
GGAGAGGTGCCTGAGAGGCCGAAAGGAACTCACTGCTAACGAGTCGTGGGCCCATAAGCC
CACCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
ttttcaagat
Secondary structure (Cloverleaf model)
>WENV170978244	Ser	GCT
                   t      GCCA ttttcaagat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G T C C       G A G G G     C
    G         | | |                 T T
    C       A A G G
      C G A        A     CGTGGGCCCATAAGCCCACC
                    A - T
                    C - G
                    T - A
                    C - G
                    A   C
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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