The detailed information of tRNA gene sequence


Sequence ID>WENV170978247
Genome IDMTKZ01044348
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1301
End posion on genome 1226
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cgttttttgt
tRNA gene sequence 
GGGTCCTTAGCTCAGCTGGGAGAGCGCCTGTTTTGCAAGCAGGAGGTCGACGGTTCGATC
CCGTTAGGATCCACCA
Downstream region at tRNA end position 
tttttgtata
Secondary structure (Cloverleaf model)
>WENV170978247	Ala	TGC
                   t      ACCA tttttgtata
                     G - C
                     G - C
                     G + T
                     T - A
                     C - G
                     C - G
                     T - A          C T
                    T     T T G C C     A
      C G A        A      + | | | |     G
    T       C T C G       G A C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    T + G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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