The detailed information of tRNA gene sequence


Sequence ID>WENV170978250
Genome IDMTKZ01044348
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1007
End posion on genome 917
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tgtaaatagt
tRNA gene sequence 
GGAGGAATACCCAAGTCCGGCTGAAGGGATCGGTCTTGAAAACCGACAGGCGTGAAAGCG
CGCGCGGGTTCGAATCCTGCTTCCTCCGCCA
Downstream region at tRNA end position 
tttaatatat
Secondary structure (Cloverleaf model)
>WENV170978250	Ser	TGA
                   t      GCCA tttaatatat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     C G T C C     A
    C T G A        A      | | + | |     G
  C         A C C C       G C G G G     C
  G           | | |                 T T
  G         A G G G
    C T G A        A     CAGGCGTGAAAGCGCGC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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