The detailed information of tRNA gene sequence


Sequence ID>WENV170978261
Genome IDMTKZ01044764
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1110
End posion on genome 1035
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taaaaatggc
tRNA gene sequence 
GGGCCTATAGCTCAATTGGTAGAGCCACCGGCTCATAACCGGTAGGTCCCTGGTTCGATC
CCAGGTGGGCCCACCA
Downstream region at tRNA end position 
aattttatga
Secondary structure (Cloverleaf model)
>WENV170978261	Met	CAT
                   c      ACCA aattttatga
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          C T
                    T     G G A C C     A
      T A A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          C     AGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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