The detailed information of tRNA gene sequence


Sequence ID>WENV170978265
Genome IDMTKZ01044929
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 965
End posion on genome 873
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aattaaataa
tRNA gene sequence 
GGAGAAGTACTCAAGTGGCTAAAGAGGAACCCCTGCTAAGGGTTTAGGCTGGGTTATACT
GGTGCGAGGGTTCGAATCCCTCCTTCTCCGCCA
Downstream region at tRNA end position 
gttaaaagac
Secondary structure (Cloverleaf model)
>WENV170978265	Ser	GCT
                   a      GCCA gttaaaagac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | | | | |     G
    G       A C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      T A A        G     TAGGCTGGGTTATACTGGTGC
                    A - T
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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