The detailed information of tRNA gene sequence


Sequence ID>WENV170978271
Genome IDMTKZ01045023
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 787
End posion on genome 878
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aagataatat
tRNA gene sequence 
GGAGAGTTGGTCGAGATGGTCGAAGGCGCTCGCCTGGAAAGTGAGTATACGTCAAAAACG
TATCATGGGTTCGAATCCCATACTCTCCGCCA
Downstream region at tRNA end position 
gagaatatta
Secondary structure (Cloverleaf model)
>WENV170978271	Ser	GGA
                   t      GCCA gagaatatta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     T A C C C     A
    T A G A        G      | | | | |     G
  G         G C T G       A T G G G     C
  G           | + |                 T T
  T         A G G C
    C G A          G     TATACGTCAAAAACGTATC
                    C - G
                    T - A
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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