The detailed information of tRNA gene sequence


Sequence ID>WENV170978287
Genome IDMTKZ01045906
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 146
End posion on genome 69
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cttgaaaagt
tRNA gene sequence 
GGAGCTGTAGCTCAATTCGGTTAGAGCGCTGGCCTGTCACGCCAGAGGTCGCGGGTTCAA
GTCCCGTCAGCTCCGCCA
Downstream region at tRNA end position 
cttttttcaa
Secondary structure (Cloverleaf model)
>WENV170978287	Asp	GTC
                   t      GCCA cttttttcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     T G C C C     A
    T T A A        A      + | | | |     A
  C         C T C G       G C G G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     AGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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