The detailed information of tRNA gene sequence


Sequence ID>WENV170978289
Genome IDMTKZ01046034
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 826
End posion on genome 901
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
cggtgaacaa
tRNA gene sequence 
GGGCCCGTAGCTCAGCTGGGAGAGCGCCACAATGGCATTGTGGAGGCCAAGGGTTCGAGC
CCCTTCGGGTCCACCT
Downstream region at tRNA end position 
atcgttccgg
Secondary structure (Cloverleaf model)
>WENV170978289	Ala	GGC
                   a      ACCT atcgttccgg
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C          C G
                    T     T T C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A A G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGCC
                    C - G
                    C - G
                    A - T
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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