The detailed information of tRNA gene sequence


Sequence ID>WENV170978320
Genome IDMTKZ01046954
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 769
End posion on genome 693
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gaacatagaT
tRNA gene sequence 
AGGCCAGTAGCTCAATTAGGCAGAGCACCGCTCTCCAAAAGCGGGGGTTGTGGGTTCAAT
TCCTGCCTGGCCTGGCt
Downstream region at tRNA end position 
ggaacctgac
Secondary structure (Cloverleaf model)
>WENV170978320	Trp	CCA
                   T      GGCt ggaacctgac
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T T
                    T     C G T C C     A
      T A A        A      | + + | |     A
    T       C T C G       G T G G G     C
    A       | | | |                 T T
    G       G A G C
      G C A        A     GGGTT
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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