The detailed information of tRNA gene sequence


Sequence ID>WENV170978323
Genome IDMTKZ01047030
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 542
End posion on genome 470
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tcgacccgac
tRNA gene sequence 
CGGGGAGTGGCGCAGTGGTAGCGTTCCTGCTTTGGGTGCAGGAGGTCGGGGGTTCAAATC
CCCCCTCCCCGACtg
Downstream region at tRNA end position 
gtaccgacac
Secondary structure (Cloverleaf model)
>WENV170978323	Pro	TGG
                   c      ACtg gtaccgacac
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C C C C C     A
        G A        G      | | | | |     A
      T     C G C G       G G G G G     C
      G     | | | +                 T T
      G     G C G T
        T A        T     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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