The detailed information of tRNA gene sequence


Sequence ID>WENV170978326
Genome IDMTKZ01047354
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2105
End posion on genome 2015
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gaaacctgtt
tRNA gene sequence 
GGAGAGATGCCGGAGTGGTTGATCGGGGCGGTCTCGAAAACCGTTATGGGTCTCGTACCC
ATCGTGGGTTCGAACCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
caaaaaatgc
Secondary structure (Cloverleaf model)
>WENV170978326	Ser	CGA
                   t      GCCA caaaaaatgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          C A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G       + | | |                 T T
    T       T C G G
      T G A        G     TATGGGTCTCGTACCCATC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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