The detailed information of tRNA gene sequence


Sequence ID>WENV170978332
Genome IDMTKZ01047522
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2480
End posion on genome 2568
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aagatgcgtt
tRNA gene sequence 
GGAGGCGTCGCATAGTGGCCTAGTGCGCCCGCCTGCTAAGTGGGTTGGGGTTAAAGACCC
CTCGCGGGTTCAAATCCCGCCGCCTCCGCtg
Downstream region at tRNA end position 
cggtcacgaa
Secondary structure (Cloverleaf model)
>WENV170978332	Ser	GCT
                   t      GCtg cggtcacgaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C G C C C     A
      T G A        C      | | | | |     A
    G       T A C G       G C G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TTGGGGTTAAAGACCCCTC
                    C - G
                    C - G
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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