The detailed information of tRNA gene sequence


Sequence ID>WENV170978338
Genome IDMTKZ01047750
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 364
End posion on genome 290
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
attggcgttc
tRNA gene sequence 
GGGGGCGTGGTGTAGTGGTCTAACATGTGGCCCTGTCAAGGCCAAGATCGCGGGTTCAAA
TCCCGTCGCTCCCGCac
Downstream region at tRNA end position 
caaaaaaagg
Secondary structure (Cloverleaf model)
>WENV170978338	Asp	GTC
                   c      GCac caaaaaaagg
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          T A
                    T     T G C C C     A
      T G A        G      + | | | |     A
    G       T G T G       G C G G G     C
    G       | | | +                 T T
    T       A C A T
      C T A        G     AGATC
                    T - A
                    G - C
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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