The detailed information of tRNA gene sequence


Sequence ID>WENV170978340
Genome IDMTKZ01047837
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3561
End posion on genome 3489
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tacgcttaac
tRNA gene sequence 
GGCGAGGTAGCTCAGTGGCAGAGCAGGGGACTCATAAGCCCTTTGTCGTGAGTTCAACTC
TCACCCTCGCCACtt
Downstream region at tRNA end position 
ttcttattaa
Secondary structure (Cloverleaf model)
>WENV170978340	Met	CAT
                   c      ACtt ttcttattaa
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T C
                    T     C A C T C     A
        G A        A      | | | | |     A
      T     C T C G       G T G A G     C
      G     | | | |                 T T
      G     G A G C
        C A        A     TTGTC
                    G + T
                    G - C
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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