The detailed information of tRNA gene sequence


Sequence ID>WENV170978350
Genome IDMTKZ01048099
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 6505
End posion on genome 6432
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
caaggccatc
tRNA gene sequence 
GGTCTCCTGGCTCAGTTGGTTAGAGCGCACGGTTCACATCCGTGAGGTCACAGGTTCAAG
TCCTGTGGAGACCAtgc
Downstream region at tRNA end position 
gaaagccgcg
Secondary structure (Cloverleaf model)
>WENV170978350	Val	CAC
                   c      Atgc gaaagccgcg
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     C - G
                     C - G          T G
                    T     T G T C C     A
      T G A        G      | | | | |     A
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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