The detailed information of tRNA gene sequence


Sequence ID>WENV170978351
Genome IDMTKZ01048134
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 213
End posion on genome 137
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gcacctgttc
tRNA gene sequence 
GGGGGCGTGGTGTAGCGGTCAAACATGCGGCCCTGTCAAGGCCGAGATCGCGGGTTCGAA
TCCCGTCGCTCCCGCCA
Downstream region at tRNA end position 
aagaaaaagc
Secondary structure (Cloverleaf model)
>WENV170978351	Asp	GTC
                   c      GCCA aagaaaaagc
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          T A
                    T     T G C C C     A
      C G A        G      + | | | |     G
    G       T G T G       G C G G G     C
    G       | | | +                 T T
    T       A C A T
      C A A        G     AGATC
                    C - G
                    G - C
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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