The detailed information of tRNA gene sequence


Sequence ID>WENV170978363
Genome IDMTKZ01048434
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1298
End posion on genome 1372
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
tcgcgcagat
tRNA gene sequence 
GCACCCGTGGCGCAATTGGATAGCGCATCGGTCTTCGGAACCGAGGGTTACAGGTTCGAA
TCCTGTCGGGTGTACtt
Downstream region at tRNA end position 
cacaagccct
Secondary structure (Cloverleaf model)
>WENV170978363	Arg	TCG
                   t      ACtt cacaagccct
                     G + T
                     C - G
                     A - T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G T C C     A
      T A A        G      | | | | |     G
    T       C G C G       A C A G G     C
    G       | | | |                 T T
    G       G C G C
      A T A        A     GGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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