The detailed information of tRNA gene sequence


Sequence ID>WENV170978367
Genome IDMTKZ01048506
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 10178
End posion on genome 10251
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
taggctttcc
tRNA gene sequence 
GGGCGGATAGCTCAGTTGGTCAGAGCGCATCTTTTACACAGATGAGGTCGCAGGTTCGAG
CCCTGTTCTGCCCAttt
Downstream region at tRNA end position 
tttttattta
Secondary structure (Cloverleaf model)
>WENV170978367	Val	TAC
                   c      Attt tttttattta
                     G - C
                     G - C
                     G - C
                     C - G
                     G + T
                     G - C
                     A - T          C G
                    T     T G T C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        G     AGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    T - A
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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