The detailed information of tRNA gene sequence


Sequence ID>WENV170978368
Genome IDMTKZ01048506
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 6183
End posion on genome 6112
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
attgtttcac
tRNA gene sequence 
GTCTCCGTGGCCTAATGGACAAGGCACTGGCCTCCGGAGCCAGCAATCTGGGTTCGAATC
CCAGCGGAGATAtat
Downstream region at tRNA end position 
tctttatttg
Secondary structure (Cloverleaf model)
>WENV170978368	Arg	CCG
                   c      Atat tctttatttg
                     G + T
                     T - A
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C          T A
                    T     G A C C C     A
      T A A        G      | | | | |     G
    G       T C C G       C T G G G     C
    G       | | | |                 T T
    A       A G G C
      C A          A     CAAT
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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