The detailed information of tRNA gene sequence


Sequence ID>WENV170978369
Genome IDMTKZ01048525
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1108
End posion on genome 1036
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gaaagttgca
tRNA gene sequence 
GGGCCCATAGCTCAGCGGCAGAGCAGGGGGCTCATAACCTCTTGGTCGTAGGTTCGAATC
CTACTGGGCCCACtg
Downstream region at tRNA end position 
attcctaatt
Secondary structure (Cloverleaf model)
>WENV170978369	Met	CAT
                   a      ACtg attcctaatt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     C A T C C     A
        G A        A      | | | | |     G
      C     C T C G       G T A G G     C
      G     | | | |                 T T
      G     G A G C
        C A        A     TGGTC
                    G + T
                    G - C
                    G + T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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