The detailed information of tRNA gene sequence


Sequence ID>WENV170978375
Genome IDMTKZ01048645
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5634
End posion on genome 5547
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
ttcgcaccct
tRNA gene sequence 
GCGGGAATGGCGGAATTGGCAGACGCGCTAGATTCAGGTTCTAGTGAGCAATACGTTCAT
GCAGGTTCAAGTCCTGTTTCCCGCACCA
Downstream region at tRNA end position 
gcgccgtgag
Secondary structure (Cloverleaf model)
>WENV170978375	Leu	CAG
                   t      ACCA gcgccgtgag
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T          T G
                    T     T G T C C     A
      T A A        G      + | | | |     A
    T       G G C G       G C A G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TGAGCAATACGTTCAT
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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