The detailed information of tRNA gene sequence


Sequence ID>WENV170978378
Genome IDMTKZ01048777
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1595
End posion on genome 1500
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ataaataaac
tRNA gene sequence 
GGAAGTGCCAAGGCGCCTGGTGGGTTTCCTGGTCTTCAAAACCAGTGCACCGGTGAAAAG
CTGGTGGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
taaccagtct
Secondary structure (Cloverleaf model)
>WENV170978378	SeC(p)	TCA
                   c      GCCA taaccagtct
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     C - G          T T
                    C     T A C C C     A
      C C G        A      + | | | |     G
    T       C G G A       G T G G G     C
    G       | + + |                 T T
    G       G T T T
      T G G        C     TGCACCGGTGAAAAGCTGGTGG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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