The detailed information of tRNA gene sequence


Sequence ID>WENV170978386
Genome IDMTKZ01049015
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1919
End posion on genome 1995
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gaacctgtac
tRNA gene sequence 
GGGCTCGTGGTGTAGCGGCCTAACACATCTCCCTGTCGAGGAGAAGATCGCCGGTTCAAA
TCCGGTCGAGCCCGCAA
Downstream region at tRNA end position 
cggaatccct
Secondary structure (Cloverleaf model)
>WENV170978386	Asp	GTC
                   c      GCAA cggaatccct
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     T G G C C     A
      C G A        G      + | | | |     A
    G       T G T G       G C C G G     C
    G       | | | |                 T T
    C       A C A C
      C T A        A     AGATC
                    T - A
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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